Ontology Use Patterns Repository

Name

Metastasis of colon cancer to the lung, as diagnosed with a lung biopsy

Description

This pattern represents the instances required to represent a diagnosis that a person's lung cancer is the result of colon cancer spreading to their lungs, as determined in part by a biopsy of the neoplasm in the lung.

RDF

_:some_person1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/NCBITaxon_9606> .
_:some_colon1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/UBERON_0001155> .
_:some_cancer1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/DOID_162> .
_:some_cancer2 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/DOID_162> .
_:some_lung1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/UBERON_0002048> .
_:some_neoplasm1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.ebi.ac.uk/efo/EFO_0000616> .
_:some_tissue1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/UBERON_0000479> .
_:some_biopsy1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/ERO_0001334> .
_:some_diagnosing1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/OGMS_0000104> .
_:some_diagnosis1 <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.obolibrary.org/obo/OGMS_0000073> .
_:some_biopsy1 <http://purl.obolibrary.org/obo/OBI_0000299> _:some_tissue1 .
_:some_cancer1 <http://purl.obolibrary.org/obo/RO_0000052> _:some_colon1 .
_:some_cancer2 <http://purl.obolibrary.org/obo/RO_0000052> _:some_lung1 .
_:some_person1 <http://purl.obolibrary.org/obo/BFO_0000051> _:some_colon1 .
_:some_person1 <http://purl.obolibrary.org/obo/BFO_0000051> _:some_lung1 .
_:some_diagnosing1 <http://purl.obolibrary.org/obo/BFO_0000051> _:some_biopsy1 .
_:some_neoplasm1 <http://purl.obolibrary.org/obo/RO_0001025> _:some_lung1 .
_:some_tissue1 <http://purl.obolibrary.org/obo/RO_0001000> _:some_neoplasm1 .
_:some_biopsy1 <http://purl.obolibrary.org/obo/OBI_0000293> _:some_lung1 .

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Terms Used

<http://purl.obolibrary.org/obo/OBI_0000299>
<http://purl.obolibrary.org/obo/UBERON_0001155>
<http://purl.obolibrary.org/obo/NCBITaxon_9606>
<http://purl.obolibrary.org/obo/DOID_162>
<http://purl.obolibrary.org/obo/RO_0000052>
<http://purl.obolibrary.org/obo/RO_0001025>
<http://purl.obolibrary.org/obo/RO_0001000>
<http://www.ebi.ac.uk/efo/EFO_0000616>
<http://purl.obolibrary.org/obo/OGMS_0000104>
<http://purl.obolibrary.org/obo/BFO_0000051>
<http://purl.obolibrary.org/obo/OGMS_0000073>
<http://www.w3.org/1999/02/22-rdf-syntax-ns#type>
<http://purl.obolibrary.org/obo/UBERON_0002048>
<http://purl.obolibrary.org/obo/ERO_0001334>
<http://purl.obolibrary.org/obo/UBERON_0000479>
<http://purl.obolibrary.org/obo/OBI_0000293>